Cheap flights from Heraklion to Malta
Choose between Sky Express, Aegean, or Air Malta to find the best price
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Cheapest one-way trip
£43
Cheapest round-trip
£110
Average round-trip
£256
Most popular airline
Sky Express
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One-way trips
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The most popular airlines for this route are Sky Express, Aegean, Air Malta, Alitalia, and Lufthansa. Heraklion and Malta have 50 direct flights per week.
Weekly flights
| Mondays | Tuesdays | Wednesdays | Thursdays | Fridays | Saturdays | Sundays | |
|---|---|---|---|---|---|---|---|
| Number of flights | 4 | 7 | 10 | 4 | - | 15 | 10 |
Check-in for a flight from Heraklion to Malta
| Name | Carrier code | IATA Code | Passport needed during booking | Airport check-in closes | Online check-in available |
|---|---|---|---|---|---|
| Sky Express | SEH | GQ | Yes | Unknown | No |
| Aegean | AEE | A3 | Yes | Unknown | No |
| Air Malta | AMC | KM | Yes | Unknown | No |
| Alitalia | AZA | AZ | Yes | Unknown | No |
| Lufthansa | DLH | LH | Yes | Unknown | No |
Frequently asked questions
What are the most popular routes to and from Heraklion?
Travelers frequently search for route combinations, such as Heraklion and Athens International, Berlin Brandenburg, Santorini (Thira) National, Brussels South Charleroi, Thessaloniki International Airport Macedonia , Airport Copenhagen, Henri Coandă International, John Paul II International Airport Kraków–Balice, Bologna Guglielmo Marconi, Kos Island International, Cluj International.
What are the most popular routes to and from Malta?
Travelers frequently search for route combinations, such as Malta and Barcelona–El Prat, Berlin Brandenburg, Milan Bergamo International Airport, Catania–Fontanarossa, Venice Marco Polo, Naples International, Marseille Provence, Toulouse–Blagnac, Verona Villafranca, Turin, Caen – Carpiquet.
What airports are near Heraklion?
The main airport in Heraklion is Heraklion International. It is also served by Santorini (Thira) National, Heraklion International, Chania International, Sitia Public.
What airports are near Malta?
The main airport in Malta is Malta International. It is also served by Malta International, Catania–Fontanarossa, Comiso.
Is it possible to combine flights, buses, and trains in one itinerary when traveling between Heraklion and Malta?
What is Virtual Interlining and how do I use it?
Which airlines fly between Heraklion and Malta?
When's the best time to travel between Heraklion and Malta?
What flights operate between Heraklion and Malta?
How many airports are there near Heraklion?
How many airports are there near Malta?
What time do nonstop (direct) flights between Heraklion and Malta depart?
What time do nonstop (direct) flights between Heraklion and Malta arrive?
What time do flights between Heraklion and Malta depart?
What time do flights between Heraklion and Malta arrive?
Planning a trip? Thanks to our Virtual Interlining algorithm, we offer billions of route combinations between any A and any B in the world by plane, train, and bus. Find the cheapest routes and best deals for you, as well as the best dates on which to travel.
Explore alternative destinations
Flights from Heraklion
- Flights from Heraklion to Athens International
- Flights from Heraklion to Berlin Brandenburg
- Flights from Heraklion to Santorini (Thira) National
- Flights from Heraklion to Brussels South Charleroi
- Flights from Heraklion to Thessaloniki International Airport Macedonia
- Flights from Heraklion to Airport Copenhagen
- Flights from Heraklion to Henri Coandă International
- Flights from Heraklion to John Paul II International Airport Kraków–Balice
- Flights from Heraklion to Bologna Guglielmo Marconi
- Flights from Heraklion to Kos Island International
- Flights from Heraklion to Cluj International
Flights to Malta
- Flights from Barcelona–El Prat to Malta
- Flights from Berlin Brandenburg to Malta
- Flights from Milan Bergamo International Airport to Malta
- Flights from Catania–Fontanarossa to Malta
- Flights from Venice Marco Polo to Malta
- Flights from Naples International to Malta
- Flights from Marseille Provence to Malta
- Flights from Toulouse–Blagnac to Malta
- Flights from Verona Villafranca to Malta
- Flights from Turin to Malta
- Flights from Caen – Carpiquet to Malta
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